https://alserglab.r-universe.devRecent package updates in alserglabR-universehttps://github.com/alserglab.pnghttps://alserglab.r-universe.devFri, 26 Jun 2026 22:24:35 GMTalsergbox@gmail.com (Alexey Sergushichev)The package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which allows to use accurate stantard approaches to multiple hypothesis correction.https://github.com/r-universe/bioc/actions/runs/28281300010Fri, 26 Jun 2026 22:24:35 GMTfgsea1.39.2successhttps://bioc.r-universe.devhttps://github.com/bioc/fgseageseca-tutorial.Rmdgeseca-tutorial.htmlGene set co-regulation analysis tutorial2025-11-04 23:43:302026-06-26 16:44:14fgsea-tutorial.Rmdfgsea-tutorial.htmlUsing fgsea package2016-06-03 11:01:332025-11-04 23:43:30alsergbox@gmail.com (Alexey Sergushichev)PhantasusLite – a lightweight package with helper functions of general interest extracted from phantasus package. In parituclar it simplifies working with public RNA-seq datasets from GEO by providing access to the remote HSDS repository with the precomputed gene counts from ARCHS4 and DEE2 projects.https://github.com/r-universe/bioc/actions/runs/28080461892Tue, 23 Jun 2026 22:31:56 GMTphantasusLite1.11.4successhttps://bioc.r-universe.devhttps://github.com/bioc/phantasusLitephantasusLite-tutorial.RmdphantasusLite-tutorial.htmlphantasusLite tutorial2023-09-11 22:00:332026-06-18 22:54:06alsergbox@gmail.com (Alexey Sergushichev)Implements a procedure to automatically generate 2D masks for clusters on dimensional reduction plots from methods like t-SNE (t-distributed stochastic neighbor embedding) or UMAP (uniform manifold approximation and projection), with a focus on single-cell RNA-sequencing data.https://github.com/r-universe/alserglab/actions/runs/27946339826Thu, 23 Apr 2026 15:27:55 GMTmascarade0.3.4.9000successhttps://alserglab.r-universe.devhttps://github.com/alserglab/mascarademascarade-gallery.Rmdmascarade-gallery.htmlGallery of mascarade-generaded masks2025-04-20 22:14:122026-01-04 03:24:15mascarade-tutorial.Rmdmascarade-tutorial.htmlUsing mascarade package2024-12-23 19:47:432026-02-13 22:04:12